Journal of Clinical Bioinformatics is no longer published by BioMed Central. Please review our privacy policy. As we begin a fresh new year it’s time to look back over the past 12 months and take stock of some of the fascinating articles published in BMC Bioinformatics.It’s been a year where our authors have looked at many different aspects of the bioinformatics field. Authors Peter Langfelder 1 , Steve Horvath. Authors Doug Hyatt 1 , Gwo-Liang Chen, Philip F Locascio, Miriam L Land, Frank W Larimer, Loren J Hauser. Road. 2015;10(10):e0139654. The journal is abstracted and indexed by: Articles in BMC journals are listed in PubMed and archived at PubMed Central. BioMed Central Page 1 of 12 (page number not for citation purposes) BMC Bioinformatics Research article Open Access Construction of phylogenetic trees by kernel-based comparative analysis of metabolic networks S June Oh1, Je-Gun Joung2,3, Jeong-Ho Chang4 and Byoung-Tak Zhang*2,3,4 2014;15(1):311. DHHS. DOAJ is an online directory that indexes and provides access to quality open access, peer-reviewed journals. This month, we would like to highlight some new experimental methods, data analyses and software reported in the BMC series journals. We encourage our authors to … Featured books see all. Affiliation 1 Department of Human Genetics and Department of Biostatistics, University of California, Los Angeles, CA 90095, USA. For information about publishing your research in BMC journals or any BioMed Central journal, go to BioMed Central Page 1 of 12 (page number not for citation purposes) BMC Bioinformatics Methodology article Open Access Estimating mutual information using B-spline functions – an improved similarity measure for analysing gene expression data Carsten O Daub*1,4, Ralf Steuer2, Joachim Selbig1 and Sebastian Kloska1,3 The BMC Series:. 2008 Dec 29;9:559. doi: 10.1186/1471-2105-9-559. BMC Bioinformatics is an open access, peer-reviewed journal that considers articles on all aspects of the development, testing and novel application of computational and statistical methods for the modeling and analysis of all kinds of biological data, as well as other areas of computational biology. BMC Bioinformatics. NIH. Explore the BMC Range. Road; Mountain; City; 01; 02; 03; Previous Product Next Product. BioMed Central Page 1 of 7 (page number not for citation purposes) BMC Bioinformatics Research article Open Access Recovering probabilities for nucleotide trimming processes for T cell receptor TRA and TRG V-J ju nctions analyzed with IMGT tools Kevin … Bioinformatics is an official journal of the International Society for Computational Biology, the leading professional society for computational biology and bioinformatics. BMC Genomics advocates complete and transparent reporting of research. Articles from BMC Bioinformatics are provided here courtesy of BioMed Central. Members of the society receive a 15% discount on article processing charges when publishing Open Access in the journal. Featured Products. BMC Bioinformatics 2009, 10(Suppl 14):S3. Information about the open-access journal BMC Bioinformatics in DOAJ. RN Lima et al. 1 Development of an epitope conservancy analysis tool to facilitate the design of epitope-based diagnostics and vaccines Huynh-Hoa Bui1,2, John Sidney1, Wei Li1, Nicolas Fusseder1 and Alessandro Sette1* 1 La Jolla Institute for Allergy and Immunology, Division of Vaccine Discovery, 9420 Athena Circle, La Jolla, CA 92037, USA NLM. National Center for Biotechnology Information, U.S. National Library of Medicine 8600 Rockville Pike, Bethesda MD, 20894 USA. Offers an efficient and fair peer review service; Provides a home for all publishable research within the series; Innovates in approaches to peer review and publication BioMed Central Page 1 of 8 (page number not for citation purposes) BMC Bioinformatics Software Open Access RNAmute: RNA secondary structure mutation analysis tool Alexander Churkin1 and Danny Barash*1,2 Address: 1Department of Computer Science, Ben-Gurion University, 84105 Beer Sheva, Israel and 2Genome Diversity Center, Institute of BMC Bioinformatics Methodology article Open Access Using least median of squares for st ructural superposition of flexible proteins Yu-Shen Liu* 1, Yi Fang and Karthik Ramani1,2 Address: 1School of Mechanical Engineering, Purdue University, West Lafayette, IN 47907, USA and 2School of Electrical Computer Engineering Current Bioinformatics (0.921 :: 1.045) Journal of Bioinformatics and Computational Biology (0.783) Computational and Mathematical Methods in Medicine (0.766 :: 0.756) International Journal of Data Mining and Bioinformatics (0.495 :: 0.721) Journal of Data Mining in Genomics and Proteiomics (N/A) 2: Other journals that publish bioinformatics papers USA.gov. Twostroke 01 ONE More Details. The BMC Series is a collection of high-quality, peer-reviewed journals covering all scientific and clinical disciplines, focusing on the needs of the research communities which they serve.. The journal will now be published by Shanghai Institute of Clinical Bioinformatics. 3. E-Bike AMP. BioMed Central Page 1 of 18 (page number not for citation purposes) BMC Bioinformatics Research article Open Access The ordering of expression among a few genes can provide simple cancer biomarkers and signal BRCA1 mutations Xue Lin1, Bahman Afsari2, Luigi Marchionni3, Leslie Cope3, Giovanni Parmigiani3,4, Daniel Naiman*1 and Donald Geman1,5 Mountain. The BMC minimum standards of reporting checklist is intended as a tool for authors to transparently describe their research and ensure reproducibility. A Year in Bioinformatics. PLUS: Download citation style files for your favorite reference manager. A pioneer of open access publishing, BMC has an evolving portfolio of high quality peer-reviewed journals including broad interest titles such as BMC Biology and BMC Medicine, specialist journals such as Malaria Journal and Microbiome, and the BMC Series. BioMed Central Page 1 of 18 (page number not for citation purposes) BMC Bioinformatics Methodology article Open Access Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics Wiebke Timm*1,4, Alexandra Scherbart1, Sebastian Böcker2, Oliver Kohlbacher3 and Tim W Nattkemper1 BioMed Central Page 1 of 20 (page number not for citation purposes) BMC Bioinformatics Research article Open Access Seven Golden Rules for heuristic filtering of molecular formulas obtained by accurate mass spectrometry Tobias Kind and Oliver Fiehn* Address: University of California Davis, Genome Center, 451 E. Health Sci. Teammachine SLR01 ONE More Details. Support Center Support Center. BMC Bioinformatics Research article Open Access Components of the antigen processing and presentation pathway revealed by gene expression microarray analysis following B cell antigen receptor (BCR) stimulation Jamie A Lee†1, Robert S Sinkovits †3, Dennis Mock †3, Eva L Rab 1, Jennifer Cai 1, External link. Dr., Davis, CA 95616, USA BioMed Central Page 1 of 13 (page number not for citation purposes) BMC Bioinformatics Software Open Access WGCNA: an R package for weighted correlation network analysis Sun L, Liu H, Zhang L, Meng J. lncRScan-SVM: a tool for predicting long non-coding RNAs using support vector machine. Gravel. (2020) Format: eBook, Hardcover, Softcover BMC Bioinformatics is a peer-reviewed open access scientific journal covering bioinformatics and computational biology published by BioMed Central.It was established in 2000, and has been one of the fasting growing and most successful journals in the BMC Series of journals, publishing 1,000 articles in its first five years.. Abstracting and indexing. BMC Bioinformatics publishes many papers on text-mining topics, including the recently published supplement , which consists of papers presented at last year's BioCreAtIvE text-mining workshop in Granada, Spain. PubMed PubMed Central Article CAS Google Scholar 11. BMC Bioinformatics citation style guide with bibliography and in-text referencing examples: Journal articles Books Book chapters Reports Web pages. Acting as endocrine disrupters (EDC), they have been associated with several reproduc-tive disorders in animals and humans [2] and have become an important environmental concern. BioMed Central Open Access Page 1 of 9 (page number not for citation purposes) BMC Bioinformatics Software R/BHC: fast Bayesian hierarchical clustering for microarray data Richard S Savage1, Katherine Heller3, Yang Xu3, Zoubin Ghahramani3, William M Truman4, … Wickramasinghe, N. (et al.) BMC Bioinformatics. Text mining has its limits, however. BMC Bioinformatics. BMC Bioinformatics. 2010 Mar 8;11:119. doi: 10.1186/1471-2105-11-119. City. PLoS One. Delivering Superior Health and Wellness Management with IoT and Analytics. BioMed Central Page 1 of 19 (page number not for citation purposes) BMC Bioinformatics Research article Open Access Statistical modeling of biomedical corpora: mining the Caenorhabditis Genetic Center Bibliography for genes related to life span DM Blei*1, K Franks2, MI Jordan*3,4 and IS Mian*2 (Eds.) BioMed Central Page 1 of 10 (page number not for citation purposes) BMC Bioinformatics Methodology article Open Access A novel method for prokaryotic promoter prediction based on DNA stability Aditi Kanhere and Manju Bansal* Address: Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India Alpenchallenge 01 ONE More Details. Like all articles in BMC journals, this peer-reviewed article can be downloaded, printed and distributed freely for any purposes (see copyright notice below). 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